Package: ibis.insights 0.8

ibis.insights: An R Implementation of the InSiGHTS Framework
Implements the InSiGHTS (Index of Habitat Availability) modelling framework for assessing how climate change and land-use change affect the availability of suitable habitat for species over time. The package refines binary range maps or probabilistic species distribution models (SDMs) with fractional land-use layers to produce area-of-habitat (AOH) estimates across present and future time steps. An optional temporal discount function accounts for habitat maturity, allowing newly established land cover to be weighted according to its effective ecological value. Output summaries express habitat availability as absolute area or as a relative index with respect to a user-defined reference year. The package is designed to work seamlessly with the ibis.iSDM package but can also accept any SpatRaster or stars object as range input.
Authors:
ibis.insights_0.8.tar.gz
ibis.insights_0.8.zip(r-4.7)ibis.insights_0.8.zip(r-4.6)ibis.insights_0.8.zip(r-4.5)
ibis.insights_0.8.tgz(r-4.6-any)ibis.insights_0.8.tgz(r-4.5-any)
ibis.insights_0.8.tar.gz(r-4.7-any)ibis.insights_0.8.tar.gz(r-4.6-any)
ibis.insights_0.8.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ibis.insights/json (API)
NEWS
| # Install 'ibis.insights' in R: |
| install.packages('ibis.insights', repos = c('https://iiasa.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/iiasa/ibis.insights/issues
Pkgdown/docs site:https://iiasa.github.io
area-of-habitatbiodiversitybiodiversity-indicatorsiucnland-userange
Last updated from:328f8ab5ab. Checks:7 NOTE, 2 OK. Indexed: yes.
A new build is currently in progress.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 235 | ||
| source / vignettes | OK | 255 | ||
| linux-release-x86_64 | NOTE | 222 | ||
| macos-release-arm64 | NOTE | 156 | ||
| macos-oldrel-arm64 | NOTE | 140 | ||
| windows-devel | NOTE | 185 | ||
| windows-release | NOTE | 228 | ||
| windows-oldrel | NOTE | 216 | ||
| wasm-release | OK | 143 |
Exports:align_temporalinsights_areainsights_discountinsights_fractioninsights_summaryrelChangerelChangeSymst_clamp
Dependencies:abindassertthatbackportsCFtimecheckmateclassclassIntclicodetoolscpp11DBIdigestdistributionaldoFuturedplyre1071farverFNNforeachfuturefuture.applygenericsgeodistggplot2globalsgluegtableibis.iSDMisobanditeratorsKernSmoothlabelinglatticelifecyclelistenvlubridatemagrittrMASSMatrixmatrixStatsncdf4ncmetanumDerivparallellypillarpkgconfigposteriorproxypurrrR6RColorBrewerRcpprlangRNetCDFs2S7scalessfstarsstringistringrtensorAterratibbletidyrtidyselecttimechangeunitsutf8uuidvctrsviridisLitewithrwk
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Harmonize and align temporal raster layers | align_temporal align_temporal,ANY,ANY-method align_temporal,SpatRaster,SpatRaster-method align_temporal,stars,stars-method |
| Recreate a derivative variable based on their range | create_derivate_range |
| Apply InSiGHTS with continuous areal land-use data | insights_area insights_area,ANY,ANY-method insights_area,SpatRaster,SpatRaster-method insights_area,SpatRaster,stars-method insights_area,stars,SpatRaster-method insights_area,stars,stars-method |
| Apply temporal discount to land-use layers based on an age variable | insights_discount insights_discount,SpatRaster,SpatRaster-method insights_discount,SpatRaster,stars-method insights_discount,stars,SpatRaster-method insights_discount,stars,stars-method |
| Apply InSiGHTS with fractional land-use data | insights_fraction insights_fraction,ANY,ANY-method insights_fraction,SpatRaster,SpatRaster-method insights_fraction,SpatRaster,stars-method insights_fraction,stars,SpatRaster-method insights_fraction,stars,stars-method |
| Summarize inSiGHTS into an index | insights_summary insights_summary,SpatRaster-method insights_summary,stars-method |
| Relative change function | relChange |
| Symmetric relative difference function | relChangeSym |
| Clamp raster values to specific bounds | st_clamp |
